Common Feature Engineering Techniques Ema Used in Real-World Data

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Posted Oct 28, 2024

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Feature engineering is a crucial step in data science, and EMA (Exposure-Response Modeling and Analysis) is no exception. EMA uses a variety of feature engineering techniques to transform raw data into meaningful insights.

One common technique used in EMA is data normalization, which scales numerical data to a common range. This helps prevent features with large ranges from dominating the model. For example, in a study on medication efficacy, researchers normalized the dosage amounts to prevent the larger dosages from overwhelming the model.

Data transformation is another technique used in EMA. This involves converting categorical data into numerical data that can be used by machine learning algorithms. For instance, in a study on patient outcomes, researchers transformed the categorical variable "disease severity" into a numerical variable using a one-hot encoding technique.

Feature extraction is also a key technique used in EMA. This involves selecting the most relevant features from a large dataset to improve model performance. In a study on genetic predisposition to disease, researchers extracted the top 10 genetic variants associated with the disease to use in their EMA model.

Data Preparation

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Data Preparation is a crucial step in feature engineering, where you convert raw data into a format that Machine Learning models can use. This involves data cleansing, fusion, ingestion, loading, and other operations to get your data ready for analysis.

You need to perform these operations to start the feature engineering process, which is the preliminary stage. This is because raw data collected from various sources is often messy and needs to be cleaned up before it can be used.

Think of it like trying to build a puzzle with missing pieces - you need to gather all the necessary data and put it together in a way that makes sense. This process can be time-consuming, but it's essential for getting accurate results.

Data cleansing involves removing any errors or inconsistencies in the data, such as duplicate values or missing information. This helps to ensure that your analysis is based on reliable data.

By performing data preparation, you can gain more insights from your data and make more accurate predictions. For example, transforming data into different formats, like converting weight into BMI, can reveal new patterns and correlations that might not be apparent otherwise.

Feature Engineering Techniques

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Feature Engineering Techniques are crucial in machine learning as they help transform raw data into a format that's more suitable for modeling. This can involve imputing missing data, dealing with outliers, and scaling features to a common range.

Some common techniques include binning, log transformation, and one-hot encoding. Binning involves grouping data into bins or buckets, while log transformation helps compress large numbers and expand small numbers. One-hot encoding is used to convert categorical data into numerical data.

Feature engineering techniques can also involve handling categorical and numerical variables, creating polynomial features, and dealing with geographical and date data. For example, you can create indicator variables to incorporate vital information in the model, or extract months, days, and hours from a timestamp.

Here are some common feature engineering techniques:

  • Imputing missing data
  • Dealing with outliers
  • Binning
  • Log transformation
  • Data scaling
  • One-hot encoding
  • Handling categorical and numerical variables
  • Creating polynomial features
  • Dealing with geographical data
  • Working with date data

Discretization

Discretization is a technique used to group data values into bins or buckets, which helps prevent overfitting and reduces the cardinality of continuous and discrete data. This technique can be applied to numerical and categorical data values.

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There are three main methods of discretization: grouping of equal intervals, grouping based on equal frequencies, and grouping based on decision tree sorting. Grouping of equal intervals involves dividing the data into equal-sized bins, while grouping based on equal frequencies involves dividing the data into bins with approximately the same number of observations.

Discretization can be used to reduce the noise and non-linearity in the dataset, making it easier to identify outliers and invalid values. It can also improve the accuracy of predictive models.

Here are the three main methods of discretization:

Discretization is a powerful technique for feature engineering, and it can be used in conjunction with other techniques to create a robust and accurate machine learning model.

Splitting

Splitting features into parts can sometimes improve their value toward the target to be learned.

Date and Time can be split into separate columns, as Date better contributes to the target function than Date and Time.

You can split a single column, like a movie's name, into two separate columns: one for the movie name and another for the year of release.

This can be done with simple Python functions, making it a straightforward process.

See what others are reading: Real Time Feature Engineering

Scaling

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Scaling is a crucial step in feature engineering that helps machine learning algorithms process data more efficiently. It involves rescaling data to a common range, which is essential for algorithms that are sensitive to the scale of input values.

Scaling can be achieved through various techniques, including Min-Max Scaling and Standardization. Min-Max Scaling rescales all values in a feature from 0 to 1, while Standardization subtracts the mean and divides by the variance to arrive at a distribution with a 0 mean and variance of 1.

Some machine learning algorithms, such as neural networks, require data to be transformed into small numbers within a specific range. This can be achieved using standard scalers, min-max scalers, or robust scalers.

The choice of scaling technique depends on the type of data and the algorithm being used. For example, Min-Max Scaling is suitable for data with a large range of values, while Standardization is better suited for data with a normal distribution.

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Here are some common scaling techniques:

  • Min-Max Scaling: rescales all values in a feature from 0 to 1
  • Standardization: subtracts the mean and divides by the variance
  • Absolute Maximum: divides all figures in the data set by its max value
  • Normalization: similar to Standardization, but with a different formula

Scaling is not just about rescaling data, but also about making it more comparable. For example, comparing the size of planets is easier when we normalize their values based on their proportions rather than their actual diameters.

By scaling data, we can ensure that each feature contributes equally to the final distance, making it easier for machine learning algorithms to process. This is especially important for algorithms that calculate distance using the Euclidean distance formula.

Shuffling

Shuffling is a powerful feature engineering technique that helps retain logical relationships between data columns while mixing up the data to minimize risks.

It randomly shuffles data from a dataset within an attribute or a set of attributes, replacing sensitive information with other values for the same attribute from a different record.

Data shuffling can be implemented using only rank order data, making it a nonparametric method for masking.

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This technique is particularly useful for masking confidential numerical data, as the values of the confidential variables are shuffled among the observed data points.

Data shuffling retains all the desirable properties of the original data and performs better than other masking techniques in terms of data utility and disclosure risk.

It's essential to shuffle the dataset well before splitting it into training, testing, and validation datasets to avoid any element of bias or patterns in the split datasets.

Shuffling improves the model quality and predictive performance of the machine learning model it's applied to.

Data shuffling is applicable to both small and large datasets, making it a versatile technique for feature engineering.

Determining Importance

Using the most optimal features will result in less complex models.

You can use certain algorithms to rank features out of the box. These algorithms include LightGBM, Catboost, Random Forests, and XGBoost.

You can disregard less important features and work with the most important ones. Features with high scores can also be used to create new features.

Important features are often highly correlated to the target, the item being predicted.

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Using Domain Knowledge

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Using Domain Knowledge is a powerful feature engineering technique that can greatly enhance the accuracy of your model. By leveraging your understanding of the problem domain, you can create new features that are tailored to the specific needs of your project.

Consulting experts in the field can be incredibly valuable in identifying important features that may not be immediately apparent. For example, in the Kiva dataset, a new feature was created from the ratio of the lender count and the term in months.

Domain knowledge can also help you identify the most relevant features to include in your model. By working with an expert, you can prioritize the features that are most likely to impact the outcome.

By applying domain knowledge, you can create features that are more meaningful and relevant to your problem. This can lead to better model performance and more accurate predictions.

Here are some examples of domain knowledge in action:

These features can be used to create new features that are more relevant to your problem. For instance, you could create a feature that represents the ratio of lender count to term in months.

Machine Learning

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Domain knowledge can be a powerful tool in selecting features, as it allows you to include words or phrases that are commonly used in a particular context, such as spam emails. For example, if you're building a spam filter, you can use your knowledge of spam email patterns to select relevant features.

Feature extraction and selection techniques like correlation analysis, principal components analysis (PCA), and recursive feature elimination (RFE) can also help identify the most relevant features while ignoring irrelevant or redundant ones. These techniques can be used in combination with domain knowledge to create a robust feature selection approach.

Here are some popular feature creation techniques in machine learning:

  • Aggregations (e.g., mean, median, mode, sum, difference, and product)
  • Simple mathematical operations

Feature creation involves deriving new features from existing ones, which can be done using simple mathematical operations. These new features can impact the performance of a model when carefully chosen to relate to the target variable.

To evaluate the results of feature selection, you should assess the performance of the model with the selected features and consider removing any features that don't significantly impact the model's performance. This will help you refine your feature selection approach and improve the overall effectiveness of your model.

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Data Transformation

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Data transformation is a crucial step in feature engineering that helps prepare data for machine learning algorithms. It involves converting raw data into a format that the algorithm can understand and use effectively.

Variable transformations, such as logarithmic transformations, can help normalize skewed data and reduce the impact of outliers. This is particularly useful for heavy-tailed distributions.

Data needs to be transformed to a form acceptable by the machine learning algorithm being used. Some algorithms, like LightGBM, can handle missing values by default, while others, like neural networks, will result in a loss of NAN if the data contains missing values.

To transform data, we need to consider the type of algorithm we're using. For example, distance-based algorithms like neural networks perform poorly when the data is not on the same scale.

Numerical features also need to be processed to a form that guarantees optimal results when passed to an algorithm. We can use scalers to apply transformations to numerical data.

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Here are some common transformations used for numerical data:

  • Logarithmic transformation: compresses larger numbers and expands smaller numbers
  • Square root transformation: generalizes the logarithmic transformation
  • Box-Cox transformation: generalizes the square root and logarithmic transformations

Data transformation is not a one-size-fits-all process. We need to carefully consider the type of algorithm we're using and the characteristics of our data to choose the right transformation technique.

Data Handling

Data handling is a crucial step in the feature engineering process. You need to convert raw data into a format that the model can use.

To start, you'll perform data cleansing to remove any errors or inconsistencies. This is essential for ensuring the accuracy of your model.

Data fusion is also important, as you'll need to combine data from various sources into a single, coherent dataset.

Handling Missing Values

Handling missing values is a crucial step in preparing data for machine learning. It's essential to identify and address missing values to ensure accurate results.

Missing values can be caused by various factors, including human error, data flow interruptions, and cross-dataset errors. Dealing with missing values is crucial because data completeness impacts how well machine learning models perform.

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You can dismiss rows with less than 20-30% complete data. This is a common approach to handling missing values.

A standard approach to assigning values to missing cells is to calculate a mode, mean, or median for a column and replace the missing values with it. For example, you can use the mean, mode, or median to fill missing values.

You can also use the `fillna` function in Python to fill missing values with a chosen estimate. The `SimpleImputer` function in Scikit-learn can be used for this purpose, requiring the placeholder for the missing values and the strategy to fill the values.

Here are some strategies for handling numerical features:

It's essential to note that imputation can have its drawbacks, such as retaining data size at the cost of deteriorating data quality.

Handling Categorical Data

Handling categorical data can be a challenge, but it's essential to get it right. Categorical features can be of two main types: ordinal and non-ordinal. Ordinal categories are ordered, such as high, medium, and low salary ranges, while non-ordinal categories have no order, like sectors.

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To encode categorical features, you can use one hot encoding (OHE), which converts categorical values into numerical 1's and 0's without losing information. However, OHE can dramatically increase the number of features and result in highly correlated features.

You can also use other methods of categorical encoding, such as Count and Frequency encoding, Mean encoding, or Ordinal encoding. Each of these methods captures a different aspect of the data, and the choice of method depends on the specific problem you're trying to solve.

To handle missing categorical values, you can use imputation, which replaces missing values with the most commonly occurring value in other records. This technique is based on the principle of normal distribution, where values closer to the mean are more likely to occur.

Here are some common imputation techniques for categorical and numerical values:

It's essential to be cautious when using imputation, as it can lead to deterioration of data quality, especially when dealing with large datasets.

Categorical Encoding

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Categorical encoding is a technique used to convert categorical features into numerical values that machine learning algorithms can understand. One-hot encoding (OHE) is a popular method that converts categorical values into simple numerical 1's and 0's without losing information.

One-hot encoding can dramatically increase the number of features and result in highly correlated features, so it should be used sparingly. Besides OHE, other methods of categorical encoding include Count and Frequency encoding, Mean encoding, and Ordinal encoding.

Count and Frequency encoding captures each label's representation, while Mean encoding establishes the relationship with the target. Ordinal encoding assigns a number to each unique label, making it a useful technique for ordered categorical data.

Here are some common methods of categorical encoding:

  • One-hot encoding (OHE)
  • Count and Frequency encoding
  • Mean encoding
  • Ordinal encoding

One-hot encoding is particularly useful for categorical values like gender, seasons, pets, brand names, or age groups that need to be transformed for machine learning algorithms. It involves assigning a value of 1 if the feature is valid and 0 if it is not.

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For example, consider a table with two columns: Male and Female. One-hot encoding would result in a binary representation like this:

Normal distribution has undeniable advantages, but note that in some cases it can affect the model's robustness and accuracy of results. Label encoding is another category encoding strategy that maps each category to an integer.

Selection and Evaluation

Feature selection is crucial for machine learning, and it's essential to understand the problem you're trying to solve before selecting features. You must explore the data, look at the distribution of the features, and remove any outliers or missing values.

To select the most relevant features, use feature selection techniques such as filter, wrapper, and embedded methods. Each technique has strengths and weaknesses, so choose the most appropriate for your problem.

Evaluating the results is also crucial. Once you select a set of features, assess the results and see how well the model performs with the selected features. You may need to remove any features without significantly impacting the model's performance.

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Here are some popular statistical tests used in filter-based methods for feature selection:

Remember, selecting the right features is crucial for the effectiveness of a machine learning model. Don't be afraid to go back to feature selection if the model's accuracy doesn't meet your expectations.

Automation

Automation is a game-changer in feature engineering, allowing you to create new features automatically with tools like feature tools. This open-source library generates new features from tables of related data, saving you time and effort.

Feature tools can infer data types when creating an entity from a data frame, but you need to inform it if you have categorical columns represented by integers. This means handling categorical data before passing it to feature tools.

To define relationships between entities, you can use the loan id column, which is a common way to establish connections between tables. In feature tools, features are created using feature primitives, which are computations applied to datasets to generate new features.

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Feature primitives are divided into two categories: aggregation and transformation. Aggregation primitives take related input instances and return a single output, such as the mean or count, applied across a parent-child relationship in an entity set.

Here are the default aggregation primitives in feature tools:

  • Mean
  • Count
  • Sum
  • Min
  • Max

You can use these primitives or let feature tools use default ones when generating new features through Deep Feature Synthesis (DFS). This process accepts the relationship between entities and the target entity, then generates new features.

Best Practices

Feature engineering is all about making your data work for you.

Representing the same features differently is known as feature representation. For instance, you can represent a feature like age in different ways, such as years since birth or age in a specific category like young, adult, or old.

The goal of feature engineering is to create features that are easy to understand and use in your model. This can be done by using various techniques like feature scaling, where you scale your features to a common range, or feature encoding, where you convert categorical variables into numerical variables.

Feature representations can also be used to reduce the dimensionality of your data, making it easier to work with. This can be especially useful when dealing with large datasets.

Keith Marchal

Senior Writer

Keith Marchal is a passionate writer who has been sharing his thoughts and experiences on his personal blog for more than a decade. He is known for his engaging storytelling style and insightful commentary on a wide range of topics, including travel, food, technology, and culture. With a keen eye for detail and a deep appreciation for the power of words, Keith's writing has captivated readers all around the world.

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